Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC012358.2-201ENST00000430010 1434 ntBASIC12.62□□□□□ -0.39
SCN2BO60939 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.62□□□□□ -0.39
SCN2BO60939 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.62□□□□□ -0.39
SCN2BO60939 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCN2BO60939 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.61□□□□□ -0.39
SCN2BO60939 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.61□□□□□ -0.39
SCN2BO60939 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.61□□□□□ -0.39
SCN2BO60939 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 AC006529.1-201ENST00000459978 637 ntBASIC12.61□□□□□ -0.39
SCN2BO60939 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.61□□□□□ -0.39
SCN2BO60939 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.61□□□□□ -0.39
SCN2BO60939 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.61□□□□□ -0.39
SCN2BO60939 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC12.61□□□□□ -0.39
SCN2BO60939 CU633904.3-201ENST00000624042 1029 ntBASIC12.61□□□□□ -0.39
SCN2BO60939 LINC00244-201ENST00000625073 613 ntBASIC12.61□□□□□ -0.39
SCN2BO60939 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.61□□□□□ -0.39
SCN2BO60939 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCN2BO60939 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SCN2BO60939 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SCN2BO60939 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.6□□□□□ -0.39
SCN2BO60939 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.6□□□□□ -0.39
SCN2BO60939 CHCHD2P9-201ENST00000461726 456 ntBASIC12.6□□□□□ -0.39
SCN2BO60939 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.6□□□□□ -0.39
SCN2BO60939 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.6□□□□□ -0.39
SCN2BO60939 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC12.6□□□□□ -0.39
SCN2BO60939 METTL23-211ENST00000589977 617 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms