Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC16.8■□□□□ 0.28
CHL1O00533 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHL1O00533 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC16.8■□□□□ 0.28
CHL1O00533 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHL1O00533 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHL1O00533 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.8■□□□□ 0.28
CHL1O00533 AC018695.6-201ENST00000614011 534 ntBASIC16.8■□□□□ 0.28
CHL1O00533 AL137028.2-201ENST00000614601 256 ntBASIC16.8■□□□□ 0.28
CHL1O00533 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHL1O00533 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHL1O00533 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHL1O00533 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHL1O00533 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 USP14-208ENST00000582707 1803 ntTSL 5 BASIC16.8■□□□□ 0.28
CHL1O00533 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 AC099521.3-201ENST00000624251 2938 ntBASIC16.79■□□□□ 0.28
CHL1O00533 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 RFNG-202ENST00000429557 994 ntTSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 EEF1DP5-201ENST00000431410 772 ntBASIC16.79■□□□□ 0.28
CHL1O00533 AC006328.1-201ENST00000437571 379 ntBASIC16.79■□□□□ 0.28
CHL1O00533 AC098934.2-202ENST00000438944 1033 ntBASIC16.79■□□□□ 0.28
CHL1O00533 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.79■□□□□ 0.28
CHL1O00533 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC16.79■□□□□ 0.28
CHL1O00533 MBP-230ENST00000528160 584 ntTSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 MYL6-210ENST00000548400 573 ntTSL 3 BASIC16.79■□□□□ 0.28
CHL1O00533 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC16.79■□□□□ 0.28
CHL1O00533 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.79■□□□□ 0.28
CHL1O00533 NEK4P3-201ENST00000604859 544 ntBASIC16.79■□□□□ 0.28
CHL1O00533 OR4C3-202ENST00000611380 597 ntBASIC16.79■□□□□ 0.28
CHL1O00533 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHL1O00533 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 ALOX15P2-201ENST00000340858 1897 ntBASIC16.79■□□□□ 0.28
CHL1O00533 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 AL031432.4-201ENST00000641729 2190 ntBASIC16.79■□□□□ 0.28
CHL1O00533 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC16.79■□□□□ 0.28
CHL1O00533 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC16.79■□□□□ 0.28
CHL1O00533 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHL1O00533 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CHL1O00533 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC16.78■□□□□ 0.28
CHL1O00533 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHL1O00533 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CHL1O00533 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC16.78■□□□□ 0.28
CHL1O00533 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC16.78■□□□□ 0.28
CHL1O00533 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHL1O00533 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC16.78■□□□□ 0.28
CHL1O00533 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC16.78■□□□□ 0.28
CHL1O00533 AC010997.1-201ENST00000447646 350 ntBASIC16.78■□□□□ 0.28
CHL1O00533 RN7SL22P-201ENST00000471800 269 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms