Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.16□□□□□ -0.3
SATB2Q9UPW6 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 FBXO36P1-201ENST00000579006 471 ntBASIC13.16□□□□□ -0.3
SATB2Q9UPW6 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 AC004686.1-201ENST00000605113 538 ntBASIC13.16□□□□□ -0.3
SATB2Q9UPW6 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.16□□□□□ -0.3
SATB2Q9UPW6 PTPN20CP-201ENST00000614090 920 ntBASIC13.16□□□□□ -0.3
SATB2Q9UPW6 AC011462.4-201ENST00000616866 449 ntBASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.16□□□□□ -0.3
SATB2Q9UPW6 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 SALL4P6-201ENST00000429385 1691 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 U3.5-201ENST00000363448 216 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 KRT8P30-201ENST00000432100 650 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 BRI3P1-201ENST00000440440 378 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 RPS18P9-201ENST00000482817 460 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 BCRP4-201ENST00000506079 804 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 MIR2278-201ENST00000516344 96 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 MIR4254-201ENST00000581063 76 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AC113385.2-201ENST00000614465 762 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AL358933.1-201ENST00000565046 2830 ntBASIC13.15□□□□□ -0.3
SATB2Q9UPW6 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SATB2Q9UPW6 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.15□□□□□ -0.31
SATB2Q9UPW6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SATB2Q9UPW6 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms