Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 AC009093.9-201ENST00000566038 1611 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 RPSAP6-201ENST00000417882 882 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 AL139008.1-201ENST00000437894 228 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC11.91□□□□□ -0.5
ZIC3O60481 HLA-W-207ENST00000439514 771 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
ZIC3O60481 IGHEP2-201ENST00000519308 1256 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC11.91□□□□□ -0.5
ZIC3O60481 CCND3P2-201ENST00000579393 537 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 MIR4687-201ENST00000583618 80 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 ACTBP9-201ENST00000587663 1099 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC11.91□□□□□ -0.5
ZIC3O60481 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC11.91□□□□□ -0.5
ZIC3O60481 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ZIC3O60481 POM121L14P-201ENST00000406100 1558 ntBASIC11.91□□□□□ -0.5
ZIC3O60481 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZIC3O60481 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ZIC3O60481 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 COQ4-202ENST00000372875 928 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
ZIC3O60481 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC11.9□□□□□ -0.5
ZIC3O60481 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC11.9□□□□□ -0.5
ZIC3O60481 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC11.9□□□□□ -0.5
ZIC3O60481 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC11.9□□□□□ -0.5
ZIC3O60481 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 RPL3P5-201ENST00000441645 1232 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 KRT19P4-201ENST00000443208 943 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 DUX4L31-201ENST00000446466 1136 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC11.9□□□□□ -0.5
ZIC3O60481 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 HNRNPA3P6-201ENST00000472163 1006 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC11.9□□□□□ -0.5
ZIC3O60481 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 RPSAP67-201ENST00000584105 862 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 TLE2-205ENST00000586422 389 ntTSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 AC005357.2-202ENST00000590507 1060 ntBASIC11.9□□□□□ -0.5
ZIC3O60481 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ZIC3O60481 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC11.9□□□□□ -0.5
ZIC3O60481 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ZIC3O60481 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms