Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC13.91□□□□□ -0.18
MTHFRP42898 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 AC005332.2-201ENST00000590010 930 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 AL589743.3-201ENST00000604121 517 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 TBC1D3P1-201ENST00000590047 1693 ntBASIC13.91□□□□□ -0.18
MTHFRP42898 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MTHFRP42898 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MTHFRP42898 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MTHFRP42898 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 MARK2P9-201ENST00000430958 1727 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 AC020658.7-201ENST00000624274 2442 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 AL031577.1-201ENST00000339867 399 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC13.9□□□□□ -0.18
MTHFRP42898 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 RPL13AP5-201ENST00000439189 612 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.9□□□□□ -0.18
MTHFRP42898 AC010677.1-201ENST00000441690 412 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC13.9□□□□□ -0.18
MTHFRP42898 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 TMA16-204ENST00000508268 608 ntTSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 PRDX2P3-201ENST00000515779 586 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC13.9□□□□□ -0.18
MTHFRP42898 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 MIR4526-201ENST00000583168 87 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 AP001120.3-201ENST00000585729 489 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC13.9□□□□□ -0.18
MTHFRP42898 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC13.9□□□□□ -0.18
MTHFRP42898 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 AC245369.8-201ENST00000636589 306 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 AC099795.2-201ENST00000639582 440 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
MTHFRP42898 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 AC090643.2-201ENST00000623442 2029 ntBASIC13.9□□□□□ -0.18
MTHFRP42898 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MTHFRP42898 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.9□□□□□ -0.18
MTHFRP42898 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms