Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PDE6BP35913 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC16.17■□□□□ 0.18
PDE6BP35913 IL6RP1-201ENST00000417848 1273 ntBASIC16.17■□□□□ 0.18
PDE6BP35913 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 OR7E37P-201ENST00000421076 897 ntBASIC16.17■□□□□ 0.18
PDE6BP35913 AC106748.1-201ENST00000454801 384 ntBASIC16.17■□□□□ 0.18
PDE6BP35913 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC16.17■□□□□ 0.18
PDE6BP35913 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 MIR941-1-201ENST00000636396 72 ntBASIC16.17■□□□□ 0.18
PDE6BP35913 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 AL137784.3-201ENST00000623858 2288 ntBASIC16.17■□□□□ 0.18
PDE6BP35913 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.17■□□□□ 0.18
PDE6BP35913 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC16.17■□□□□ 0.18
PDE6BP35913 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 KRT18P45-201ENST00000515347 1333 ntBASIC16.17■□□□□ 0.18
PDE6BP35913 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDE6BP35913 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.17■□□□□ 0.18
PDE6BP35913 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PDE6BP35913 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC16.16■□□□□ 0.18
PDE6BP35913 AL139424.2-202ENST00000641335 1369 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDE6BP35913 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC16.16■□□□□ 0.18
PDE6BP35913 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC16.16■□□□□ 0.18
PDE6BP35913 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 AL356583.3-201ENST00000412354 417 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 AC098934.2-202ENST00000438944 1033 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 AL929472.4-201ENST00000447422 691 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 RPS15P5-201ENST00000449885 432 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 RN7SL105P-201ENST00000475661 299 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC16.16■□□□□ 0.18
PDE6BP35913 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC16.16■□□□□ 0.18
PDE6BP35913 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC16.16■□□□□ 0.18
PDE6BP35913 HP-215ENST00000569639 568 ntTSL 4 BASIC16.16■□□□□ 0.18
PDE6BP35913 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC16.16■□□□□ 0.18
PDE6BP35913 AC007450.4-201ENST00000614709 524 ntBASIC16.16■□□□□ 0.18
PDE6BP35913 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDE6BP35913 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.16■□□□□ 0.18
PDE6BP35913 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDE6BP35913 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.15■□□□□ 0.18
PDE6BP35913 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PDE6BP35913 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.15■□□□□ 0.18
PDE6BP35913 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC16.15■□□□□ 0.18
PDE6BP35913 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 MBL3P-201ENST00000402234 644 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDE6BP35913 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC16.15■□□□□ 0.18
PDE6BP35913 KRTAP9-10P-201ENST00000435672 207 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 ATP5G1P7-201ENST00000444398 400 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 RN7SL340P-201ENST00000470792 296 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 CMC2-202ENST00000486645 766 ntTSL 3 BASIC16.15■□□□□ 0.18
PDE6BP35913 LDHAL6CP-201ENST00000502352 1142 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 EEF1GP2-201ENST00000509352 1243 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 ABCC6P2-201ENST00000526069 590 ntBASIC16.15■□□□□ 0.18
PDE6BP35913 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PDE6BP35913 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PDE6BP35913 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDE6BP35913 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms