Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCN1P35523 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCN1P35523 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLCN1P35523 AP000897.1-201ENST00000584036 1613 ntBASIC15.25■□□□□ 0.03
CLCN1P35523 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLCN1P35523 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN1P35523 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN1P35523 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCN1P35523 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCN1P35523 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.24■□□□□ 0.03
CLCN1P35523 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CLCN1P35523 AL132994.2-201ENST00000603120 687 ntBASIC15.24■□□□□ 0.03
CLCN1P35523 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN1P35523 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN1P35523 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCN1P35523 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCN1P35523 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCN1P35523 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCN1P35523 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCN1P35523 AC044849.1-201ENST00000519737 1188 ntBASIC15.23■□□□□ 0.03
CLCN1P35523 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC15.23■□□□□ 0.03
CLCN1P35523 AC126915.1-201ENST00000522847 1038 ntBASIC15.23■□□□□ 0.03
CLCN1P35523 DNM1P51-201ENST00000558149 522 ntBASIC15.23■□□□□ 0.03
CLCN1P35523 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.23■□□□□ 0.03
CLCN1P35523 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.23■□□□□ 0.03
CLCN1P35523 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCN1P35523 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.23■□□□□ 0.03
CLCN1P35523 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLCN1P35523 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCN1P35523 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms