Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC004899.2-201ENST00000622993 3860 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AC131212.3-201ENST00000624087 4219 ntBASIC14.18□□□□□ -0.14
LMO3Q8TAP4 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LMO3Q8TAP4 AL672207.1-201ENST00000328462 1570 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 RN7SL582P-201ENST00000491078 279 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AC112250.1-201ENST00000504640 745 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AC093909.3-201ENST00000504783 336 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AC141586.1-203ENST00000567242 366 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 MIR5091-201ENST00000578707 93 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 RPSAP67-201ENST00000584105 862 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 KF455155.1-201ENST00000604493 303 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 FRG2EP-201ENST00000634243 835 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 AL365209.1-201ENST00000624418 6473 ntBASIC14.17□□□□□ -0.14
LMO3Q8TAP4 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
LMO3Q8TAP4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 CASC4P1-201ENST00000456608 1312 ntBASIC14.16□□□□□ -0.14
LMO3Q8TAP4 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 BPIFB5P-201ENST00000457066 1099 ntBASIC14.16□□□□□ -0.14
LMO3Q8TAP4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.16□□□□□ -0.14
LMO3Q8TAP4 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms