Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AGAP13P-201ENST00000417888 363 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 SLC16A14P1-201ENST00000506846 1117 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AC112694.1-202ENST00000540985 943 ntBASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42BPAQ5VT25 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 APP-205ENST00000358918 2366 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 OR2A1-AS1-203ENST00000468575 568 ntBASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 RN7SL304P-201ENST00000488028 301 ntBASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42BPAQ5VT25 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42BPAQ5VT25 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42BPAQ5VT25 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42BPAQ5VT25 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42BPAQ5VT25 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC19.27■□□□□ 0.67
CDC42BPAQ5VT25 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CDC42BPAQ5VT25 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 AL021068.1-201ENST00000392097 911 ntBASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 NUDT9P1-201ENST00000477230 745 ntBASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 AP000925.1-201ENST00000425960 1449 ntBASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42BPAQ5VT25 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AP001610.1-201ENST00000411427 1116 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 PGAM1P7-201ENST00000413837 737 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 ELOBP2-201ENST00000526184 355 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AL355353.1-201ENST00000604014 330 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 TNNT3-216ENST00000641119 941 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 LINC02228-202ENST00000641261 2489 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 PMS2CL-202ENST00000403974 1529 ntBASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42BPAQ5VT25 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms