Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ATRXP46100 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ATRXP46100 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
ATRXP46100 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ATRXP46100 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ATRXP46100 AC104581.4-201ENST00000623126 3052 ntBASIC12.03□□□□□ -0.48
ATRXP46100 ZDHHC8P1-202ENST00000418264 1403 ntBASIC12.03□□□□□ -0.48
ATRXP46100 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.03□□□□□ -0.48
ATRXP46100 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ATRXP46100 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC12.03□□□□□ -0.48
ATRXP46100 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ATRXP46100 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ATRXP46100 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
ATRXP46100 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ATRXP46100 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC12.02□□□□□ -0.48
ATRXP46100 RPL14P3-201ENST00000476715 622 ntBASIC12.02□□□□□ -0.48
ATRXP46100 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 DERL1-204ENST00000519018 575 ntTSL 4 BASIC12.02□□□□□ -0.48
ATRXP46100 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC12.02□□□□□ -0.48
ATRXP46100 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC12.02□□□□□ -0.48
ATRXP46100 AL353997.3-201ENST00000586597 589 ntBASIC12.02□□□□□ -0.48
ATRXP46100 AC003005.2-201ENST00000595422 539 ntTSL 4 BASIC12.02□□□□□ -0.48
ATRXP46100 AL121658.1-201ENST00000608489 712 ntBASIC12.02□□□□□ -0.48
ATRXP46100 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC12.02□□□□□ -0.48
ATRXP46100 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ATRXP46100 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.02□□□□□ -0.48
ATRXP46100 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ATRXP46100 AHCYP7-201ENST00000560847 1308 ntBASIC12.02□□□□□ -0.49
ATRXP46100 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ATRXP46100 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 OR2I1P-210ENST00000642037 4691 ntBASIC12.02□□□□□ -0.49
ATRXP46100 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ATRXP46100 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
ATRXP46100 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.02□□□□□ -0.49
ATRXP46100 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC12.02□□□□□ -0.49
ATRXP46100 AC103563.6-201ENST00000432787 295 ntBASIC12.02□□□□□ -0.49
ATRXP46100 RAD52-212ENST00000541619 560 ntTSL 4 BASIC12.02□□□□□ -0.49
ATRXP46100 ABHD17AP7-201ENST00000569060 595 ntBASIC12.02□□□□□ -0.49
ATRXP46100 FAM95B1-214ENST00000593216 759 ntTSL 5 BASIC12.02□□□□□ -0.49
ATRXP46100 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC12.02□□□□□ -0.49
ATRXP46100 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC12.02□□□□□ -0.49
ATRXP46100 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 AC005562.1-201ENST00000583030 3219 ntBASIC12.02□□□□□ -0.49
ATRXP46100 AC117489.1-201ENST00000625169 3217 ntBASIC12.02□□□□□ -0.49
ATRXP46100 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.02□□□□□ -0.49
ATRXP46100 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ATRXP46100 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.01□□□□□ -0.49
ATRXP46100 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 ZNRD1-202ENST00000359374 743 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC12.01□□□□□ -0.49
ATRXP46100 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 ASS1P9-201ENST00000513426 1236 ntBASIC12.01□□□□□ -0.49
ATRXP46100 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC12.01□□□□□ -0.49
ATRXP46100 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC12.01□□□□□ -0.49
ATRXP46100 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC12.01□□□□□ -0.49
ATRXP46100 AP000553.1-201ENST00000610143 430 ntBASIC12.01□□□□□ -0.49
ATRXP46100 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC12.01□□□□□ -0.49
ATRXP46100 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 CCDC181-201ENST00000367805 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.01□□□□□ -0.49
ATRXP46100 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ATRXP46100 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms