Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 ALOX15P2-201ENST00000340858 1897 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 AC025538.1-201ENST00000510707 1486 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 AC023830.3-201ENST00000612995 1455 ntBASIC16.22■□□□□ 0.19
PDE6BP35913 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PDE6BP35913 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6BP35913 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6BP35913 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.21■□□□□ 0.19
PDE6BP35913 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6BP35913 AC109326.1-201ENST00000624705 1321 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6BP35913 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
PDE6BP35913 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 AC005549.1-201ENST00000579438 1629 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 HNRNPA1P68-201ENST00000425806 979 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC16.21■□□□□ 0.19
PDE6BP35913 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC16.21■□□□□ 0.19
PDE6BP35913 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6BP35913 AC108082.1-201ENST00000510857 331 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 AL137779.3-201ENST00000553295 729 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 MIR1914-201ENST00000607800 80 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 AC138430.2-201ENST00000624068 504 ntBASIC16.21■□□□□ 0.19
PDE6BP35913 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6BP35913 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6BP35913 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.21■□□□□ 0.19
PDE6BP35913 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PDE6BP35913 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6BP35913 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6BP35913 MIPEPP1-201ENST00000413533 2027 ntBASIC16.21■□□□□ 0.18
PDE6BP35913 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6BP35913 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6BP35913 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6BP35913 BX005132.1-201ENST00000641403 1580 ntBASIC16.21■□□□□ 0.18
PDE6BP35913 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6BP35913 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PDE6BP35913 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 TPI1P3-201ENST00000335020 740 ntBASIC16.2■□□□□ 0.18
PDE6BP35913 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 OR2A15P-201ENST00000463814 900 ntBASIC16.2■□□□□ 0.18
PDE6BP35913 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC16.2■□□□□ 0.18
PDE6BP35913 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC16.2■□□□□ 0.18
PDE6BP35913 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 MT1G-204ENST00000569500 305 ntTSL 3 BASIC16.2■□□□□ 0.18
PDE6BP35913 Z93930.2-203ENST00000585003 516 ntBASIC16.2■□□□□ 0.18
PDE6BP35913 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC16.2■□□□□ 0.18
PDE6BP35913 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PDE6BP35913 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6BP35913 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6BP35913 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms