Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RPS19P1-201ENST00000415286 434 ntBASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 AC005297.3-201ENST00000446214 756 ntBASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 LINC01100-201ENST00000471921 740 ntTSL 5 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 AC008525.2-201ENST00000511000 82 ntTSL 5 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 LINC01485-204ENST00000522731 614 ntTSL 4 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 DYNLL1-211ENST00000552870 595 ntTSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 LINC00648-204ENST00000557749 443 ntTSL 5 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 AC090844.3-202ENST00000584649 535 ntTSL 4 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 ECSCR-201ENST00000618155 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 AC005906.2-216ENST00000638736 1212 ntTSL 5 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 PRAMEF31P-201ENST00000504262 1371 ntBASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 AP001189.1-201ENST00000447519 1426 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 LRRC3B-203ENST00000417744 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 LINC00638-201ENST00000555578 2518 ntBASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RIMBP3Q9UFD9 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 ZNF2-201ENST00000611147 1465 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 FAM197Y10-201ENST00000425318 520 ntBASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AC007881.2-201ENST00000434990 570 ntTSL 4 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AL513327.1-205ENST00000457957 636 ntTSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AC092611.2-201ENST00000508664 304 ntTSL 3 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 DUXAP9-202ENST00000549484 596 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 RMRP-201ENST00000602361 268 ntBASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 DUXAP10-203ENST00000610531 596 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 BTNL8-210ENST00000533815 1600 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 BEX5-203ENST00000543160 860 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AC022031.2-201ENST00000592936 555 ntTSL 4 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 LINC01198-206ENST00000595532 1125 ntBASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AC063977.1-201ENST00000600623 371 ntBASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 GAGE2E-201ENST00000621907 403 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AC012048.1-201ENST00000622980 595 ntBASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RIMBP3Q9UFD9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 HYMAI-201ENST00000635591 3347 ntBASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 OR8J3-201ENST00000301529 948 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 C1orf52-202ENST00000344356 504 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 TAC4-204ENST00000398154 624 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 RPL24-203ENST00000469605 799 ntTSL 2 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 RN7SL68P-201ENST00000488078 310 ntBASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 MRPL27-203ENST00000503633 742 ntTSL 3 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 AC010931.1-201ENST00000565063 386 ntBASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 HNRNPMP2-201ENST00000596369 599 ntBASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 PAUPAR-201ENST00000630360 2965 ntBASIC19.79■□□□□ 0.76
RIMBP3Q9UFD9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms