Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
POLR2J2Q9GZM3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
POLR2J2Q9GZM3 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
POLR2J2Q9GZM3 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
POLR2J2Q9GZM3 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
POLR2J2Q9GZM3 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 FAM95B1-212ENST00000592873 4692 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 GK-202ENST00000378941 458 ntTSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 MIR769-201ENST00000390225 118 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AL512306.1-201ENST00000432698 848 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 FTH1P22-201ENST00000456305 520 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AC095040.1-201ENST00000513286 675 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 SNORD3B-1-201ENST00000577988 758 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 RN7SL219P-201ENST00000582872 296 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 MIR4687-201ENST00000583618 80 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AL359091.4-201ENST00000610052 409 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AC091769.1-201ENST00000619576 568 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 AL031587.5-201ENST00000624344 1849 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
POLR2J2Q9GZM3 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 AC091181.1-201ENST00000623762 2098 ntBASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.42□□□□□ -0.42
POLR2J2Q9GZM3 ACTG1P2-201ENST00000415776 1125 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms