Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AMBRA1Q9C0C7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AL357054.4-201ENST00000606285 2814 ntBASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AC126564.1-201ENST00000623628 2013 ntBASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AC007274.2-201ENST00000421675 662 ntBASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AC095040.1-201ENST00000513286 675 ntBASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AL137779.3-201ENST00000553295 729 ntBASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 PHBP15-201ENST00000574228 665 ntBASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AMBRA1Q9C0C7 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms