Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
O00370 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
O00370 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 BAK1P1-201ENST00000317045 636 ntBASIC14.28□□□□□ -0.12
O00370 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
O00370 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
O00370 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.28□□□□□ -0.12
O00370 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.28□□□□□ -0.12
O00370 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 AC012358.2-201ENST00000430010 1434 ntBASIC14.28□□□□□ -0.12
O00370 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.28□□□□□ -0.12
O00370 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
O00370 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 HSPA8P9-201ENST00000485881 1943 ntBASIC14.28□□□□□ -0.12
O00370 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.28□□□□□ -0.12
O00370 AC084752.1-201ENST00000509766 622 ntBASIC14.28□□□□□ -0.12
O00370 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
O00370 SRL-202ENST00000537996 1814 ntTSL 2 BASIC14.28□□□□□ -0.12
O00370 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.28□□□□□ -0.12
O00370 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.28□□□□□ -0.12
O00370 MIR5572-201ENST00000583188 137 ntBASIC14.28□□□□□ -0.12
O00370 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.28□□□□□ -0.12
O00370 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 AL031587.5-201ENST00000624344 1849 ntBASIC14.28□□□□□ -0.12
O00370 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
O00370 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
O00370 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC14.28□□□□□ -0.12
O00370 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC14.28□□□□□ -0.12
O00370 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
O00370 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
O00370 LINC02228-202ENST00000641261 2489 ntBASIC14.27□□□□□ -0.12
O00370 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC14.27□□□□□ -0.12
O00370 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
O00370 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
O00370 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.27□□□□□ -0.12
O00370 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
O00370 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
O00370 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.27□□□□□ -0.12
O00370 ZSCAN5DP-201ENST00000600684 1488 ntBASIC14.27□□□□□ -0.12
O00370 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
O00370 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
O00370 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
O00370 AC015819.3-201ENST00000624305 2674 ntBASIC14.27□□□□□ -0.12
O00370 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.27□□□□□ -0.12
O00370 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
O00370 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.27□□□□□ -0.13
O00370 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.27□□□□□ -0.13
O00370 MPRIPP1-201ENST00000452433 1089 ntBASIC14.27□□□□□ -0.13
O00370 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.27□□□□□ -0.13
O00370 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.27□□□□□ -0.13
O00370 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.27□□□□□ -0.13
O00370 DNM1P51-201ENST00000558149 522 ntBASIC14.27□□□□□ -0.13
O00370 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.27□□□□□ -0.13
O00370 AC010976.2-201ENST00000609697 852 ntBASIC14.27□□□□□ -0.13
O00370 AP003419.4-201ENST00000616071 517 ntBASIC14.27□□□□□ -0.13
O00370 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC14.27□□□□□ -0.13
O00370 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
O00370 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms