Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 GH1-203ENST00000351388 685 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AL137779.3-201ENST00000553295 729 ntBASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 DUT-207ENST00000559416 635 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AGGF1P10-201ENST00000635005 2191 ntBASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AC005154.3-201ENST00000419639 1393 ntBASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMG20BQ9P0W2 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 LINC00567-201ENST00000569854 3409 ntBASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AP003969.2-201ENST00000623739 2275 ntBASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 RPL18AP16-201ENST00000424057 531 ntBASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 AL591926.3-201ENST00000611630 238 ntBASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 Z98259.1-201ENST00000564261 1697 ntBASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HMG20BQ9P0W2 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 AL022323.5-201ENST00000624101 2059 ntBASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 OR2T32P-201ENST00000403423 963 ntBASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 AC004522.1-201ENST00000419978 654 ntBASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 RPL3P5-201ENST00000441645 1232 ntBASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HMG20BQ9P0W2 AC010202.1-201ENST00000551181 405 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms