Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 MIR3188-201ENST00000583494 85 ntBASIC10.93□□□□□ -0.66
RAB40CQ96S21 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 TEF-202ENST00000406644 4386 ntTSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
RAB40CQ96S21 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RAB40CQ96S21 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 GBP1P1-201ENST00000394662 1740 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CICP18-201ENST00000406017 2812 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AC092139.4-201ENST00000624318 2794 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 PTN-202ENST00000393083 1599 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CTAGE7P-201ENST00000435712 2436 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 TPI1P3-201ENST00000335020 740 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 MIR1307-201ENST00000408840 149 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 FAM21FP-201ENST00000426241 1131 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 AL021707.6-201ENST00000609212 491 ntBASIC10.92□□□□□ -0.66
RAB40CQ96S21 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB40CQ96S21 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB40CQ96S21 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms