Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA2Q9Y5H9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA2Q9Y5H9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA2Q9Y5H9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA2Q9Y5H9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA2Q9Y5H9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA2Q9Y5H9 C9orf163-202ENST00000624034 2573 ntBASIC24.87■■□□□ 1.57
PCDHA2Q9Y5H9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA2Q9Y5H9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 IRS3P-201ENST00000223076 1006 ntBASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA2Q9Y5H9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
PCDHA2Q9Y5H9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA2Q9Y5H9 AC068473.5-201ENST00000616428 2072 ntBASIC24.83■■□□□ 1.57
PCDHA2Q9Y5H9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA2Q9Y5H9 MIR5787-201ENST00000611784 55 ntBASIC24.83■■□□□ 1.57
PCDHA2Q9Y5H9 MIR6821-201ENST00000617625 74 ntBASIC24.83■■□□□ 1.57
PCDHA2Q9Y5H9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA2Q9Y5H9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA2Q9Y5H9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.83■■□□□ 1.56
PCDHA2Q9Y5H9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.83■■□□□ 1.56
PCDHA2Q9Y5H9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 FP325331.1-202ENST00000623531 1380 ntBASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA2Q9Y5H9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 AC097381.1-201ENST00000429019 1296 ntBASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 AL499627.2-201ENST00000606283 725 ntBASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA2Q9Y5H9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA2Q9Y5H9 AC144652.1-201ENST00000609974 1624 ntBASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 AL353803.4-201ENST00000565882 1934 ntBASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 SLC47A1P1-202ENST00000449666 945 ntBASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHA2Q9Y5H9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms