Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 AC012414.1-201ENST00000556676 535 ntBASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHGA9Q9Y5G4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA9Q9Y5G4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 AC092437.1-201ENST00000624794 1048 ntBASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA9Q9Y5G4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 LINC00543-201ENST00000567234 1845 ntBASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA9Q9Y5G4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 AC133637.1-201ENST00000624115 1537 ntBASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGA9Q9Y5G4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 AL499627.2-201ENST00000606283 725 ntBASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA9Q9Y5G4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA9Q9Y5G4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.64■□□□□ 0.9
PCDHGA9Q9Y5G4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA9Q9Y5G4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA9Q9Y5G4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms