Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGB1Q9Y5G3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 TSPY13P-201ENST00000338964 914 ntBASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 AC087393.1-201ENST00000582896 145 ntBASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGB1Q9Y5G3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 AC080038.3-201ENST00000623346 1952 ntBASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGB1Q9Y5G3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PCDHGB1Q9Y5G3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGB1Q9Y5G3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB1Q9Y5G3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 AC004987.1-201ENST00000428627 508 ntBASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 RARRES2P1-201ENST00000474487 481 ntBASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB1Q9Y5G3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 ATP5G2P3-201ENST00000429083 425 ntBASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB1Q9Y5G3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB1Q9Y5G3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms