Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AC137767.1-201ENST00000602918 1920 ntBASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 AC010997.5-201ENST00000609182 354 ntBASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF11Q9Y3C5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RNF11Q9Y3C5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RNF11Q9Y3C5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF11Q9Y3C5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF11Q9Y3C5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF11Q9Y3C5 LINC01529-204ENST00000636474 1715 ntBASIC21.52■■□□□ 1.03
RNF11Q9Y3C5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.52■■□□□ 1.03
RNF11Q9Y3C5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF11Q9Y3C5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 AC009102.2-201ENST00000606772 1639 ntBASIC21.51■■□□□ 1.03
RNF11Q9Y3C5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF11Q9Y3C5 GUSBP5-202ENST00000510805 1989 ntBASIC21.5■■□□□ 1.03
RNF11Q9Y3C5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF11Q9Y3C5 UNC93B8-201ENST00000511903 705 ntBASIC21.5■■□□□ 1.03
RNF11Q9Y3C5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF11Q9Y3C5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RNF11Q9Y3C5 FP325331.1-202ENST00000623531 1380 ntBASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF11Q9Y3C5 AC127496.7-201ENST00000625110 1798 ntBASIC21.48■■□□□ 1.03
RNF11Q9Y3C5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms