Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSM2Q9Y333 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.71■□□□□ 0.75
LSM2Q9Y333 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LSM2Q9Y333 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.71■□□□□ 0.75
LSM2Q9Y333 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LSM2Q9Y333 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.71■□□□□ 0.75
LSM2Q9Y333 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LSM2Q9Y333 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM2Q9Y333 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LSM2Q9Y333 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.7■□□□□ 0.74
LSM2Q9Y333 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSM2Q9Y333 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.7■□□□□ 0.74
LSM2Q9Y333 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.7■□□□□ 0.74
LSM2Q9Y333 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LSM2Q9Y333 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM2Q9Y333 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LSM2Q9Y333 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.69■□□□□ 0.74
LSM2Q9Y333 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM2Q9Y333 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LSM2Q9Y333 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.69■□□□□ 0.74
LSM2Q9Y333 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LSM2Q9Y333 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LSM2Q9Y333 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LSM2Q9Y333 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
LSM2Q9Y333 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LSM2Q9Y333 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.68■□□□□ 0.74
LSM2Q9Y333 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.68■□□□□ 0.74
LSM2Q9Y333 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.68■□□□□ 0.74
LSM2Q9Y333 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
LSM2Q9Y333 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LSM2Q9Y333 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM2Q9Y333 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM2Q9Y333 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LSM2Q9Y333 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM2Q9Y333 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LSM2Q9Y333 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.67■□□□□ 0.74
LSM2Q9Y333 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LSM2Q9Y333 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 AL592293.1-201ENST00000502889 1188 ntBASIC19.66■□□□□ 0.74
LSM2Q9Y333 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
LSM2Q9Y333 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LSM2Q9Y333 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM2Q9Y333 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM2Q9Y333 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM2Q9Y333 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM2Q9Y333 GPX1-201ENST00000419349 1106 ntBASIC19.65■□□□□ 0.74
LSM2Q9Y333 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM2Q9Y333 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM2Q9Y333 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LSM2Q9Y333 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM2Q9Y333 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM2Q9Y333 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM2Q9Y333 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.64■□□□□ 0.74
LSM2Q9Y333 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM2Q9Y333 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.64■□□□□ 0.73
LSM2Q9Y333 MIR6765-201ENST00000614092 87 ntBASIC19.64■□□□□ 0.73
LSM2Q9Y333 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM2Q9Y333 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM2Q9Y333 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM2Q9Y333 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LSM2Q9Y333 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM2Q9Y333 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM2Q9Y333 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LSM2Q9Y333 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms