Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 SMAD3-212ENST00000559937 579 ntTSL 49.35□□□□□ -0.917e-6■■□□□ 13
DDX52Q9Y2R4 RNA5SP141-201ENST00000364543 120 ntBASIC9.93□□□□□ -0.827e-16■■□□□ 12.9
DDX52Q9Y2R4 GLUL-210ENST00000484996 1369 ntTSL 324.92■■□□□ 1.581e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.351e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.231e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.151e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.231e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-207ENST00000463851 939 ntTSL 311.88□□□□□ -0.511e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-211ENST00000489818 683 ntTSL 311.84□□□□□ -0.511e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-206ENST00000462444 793 ntTSL 210.54□□□□□ -0.721e-12■■□□□ 12.9
DDX52Q9Y2R4 GLUL-209ENST00000480604 908 ntTSL 59.34□□□□□ -0.911e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-204ENST00000577916 2148 ntTSL 527.69■■■□□ 2.023e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-211ENST00000582811 2039 ntTSL 224.74■■□□□ 1.553e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)24.18■■□□□ 1.463e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.393e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-205ENST00000578352 592 ntTSL 222.42■■□□□ 1.183e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.66■□□□□ 0.93e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-210ENST00000582770 1654 ntTSL 220.13■□□□□ 0.813e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-208ENST00000581800 627 ntTSL 418.89■□□□□ 0.613e-12■■□□□ 12.9
DDX52Q9Y2R4 ISYNA1-203ENST00000577820 1466 ntTSL 517.07■□□□□ 0.323e-12■■□□□ 12.9
DDX52Q9Y2R4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 11e-6■■□□□ 12.8
DDX52Q9Y2R4 FGA-203ENST00000622532 1130 ntTSL 5 BASIC11.83□□□□□ -0.521e-17■■□□□ 12.8
DDX52Q9Y2R4 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC10.31□□□□□ -0.761e-17■■□□□ 12.8
DDX52Q9Y2R4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.161e-17■■□□□ 12.8
DDX52Q9Y2R4 ATXN2-204ENST00000392645 2842 ntTSL 216.46■□□□□ 0.237e-7■■□□□ 12.8
DDX52Q9Y2R4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.683e-6■■□□□ 12.7
DDX52Q9Y2R4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.873e-6■■□□□ 12.7
DDX52Q9Y2R4 ESRRA-206ENST00000539594 747 ntTSL 333.28■■■□□ 2.923e-6■■□□□ 12.7
DDX52Q9Y2R4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.423e-6■■□□□ 12.7
DDX52Q9Y2R4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.793e-6■■□□□ 12.7
DDX52Q9Y2R4 PTBP1-211ENST00000587094 273 ntTSL 313.71□□□□□ -0.216e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-217ENST00000495731 461 ntTSL 332.7■■■□□ 2.833e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.133e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-208ENST00000470787 1544 ntTSL 226.66■■□□□ 1.863e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-226ENST00000533647 548 ntTSL 326.53■■□□□ 1.843e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-203ENST00000412341 1916 ntTSL 526.19■■□□□ 1.783e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-220ENST00000496411 1064 ntTSL 325.06■■□□□ 1.63e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-212ENST00000478107 1051 ntTSL 524.5■■□□□ 1.513e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-219ENST00000496231 656 ntTSL 324.36■■□□□ 1.493e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-224ENST00000530986 595 ntTSL 424.07■■□□□ 1.443e-8■■□□□ 12.7
DDX52Q9Y2R4 GAS6-205ENST00000610073 2169 ntTSL 222.99■■□□□ 1.273e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.253e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-215ENST00000483791 681 ntTSL 321.74■■□□□ 1.073e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-221ENST00000497847 1031 ntTSL 221.74■■□□□ 1.073e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.033e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-207ENST00000468455 644 ntTSL 521.27■■□□□ 13e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-214ENST00000483223 901 ntTSL 321.27■■□□□ 13e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-227ENST00000533927 2026 ntTSL 1 (best)20.99■□□□□ 0.953e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-222ENST00000528141 576 ntTSL 420.66■□□□□ 0.93e-8■■□□□ 12.7
DDX52Q9Y2R4 GAS6-203ENST00000480426 2507 ntTSL 219.33■□□□□ 0.693e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-230ENST00000534660 552 ntTSL 315.77■□□□□ 0.123e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)15.47■□□□□ 0.073e-8■■□□□ 12.7
DDX52Q9Y2R4 ZNF692-216ENST00000491971 805 ntTSL 214.77□□□□□ -0.053e-8■■□□□ 12.7
DDX52Q9Y2R4 CNOT6L-207ENST00000515441 572 ntTSL 418.04■□□□□ 0.482e-7■■□□□ 12.7
DDX52Q9Y2R4 CNOT6L-204ENST00000506166 781 ntTSL 212.86□□□□□ -0.352e-7■■□□□ 12.7
DDX52Q9Y2R4 CNOT6L-202ENST00000504804 1925 ntTSL 56.76□□□□□ -1.332e-7■■□□□ 12.7
DDX52Q9Y2R4 CNOT6L-206ENST00000512485 1890 ntTSL 56.62□□□□□ -1.352e-7■■□□□ 12.7
DDX52Q9Y2R4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.832e-7■■□□□ 12.7
DDX52Q9Y2R4 SNRPB-203ENST00000474384 985 ntTSL 521.52■■□□□ 1.041e-11■■□□□ 12.6
DDX52Q9Y2R4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.661e-11■■□□□ 12.6
DDX52Q9Y2R4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.661e-11■■□□□ 12.6
DDX52Q9Y2R4 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.499e-8■■□□□ 12.6
DDX52Q9Y2R4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.72■□□□□ 0.432e-8■■□□□ 12.6
DDX52Q9Y2R4 PPP2R5C-227ENST00000557268 2013 ntTSL 216.58■□□□□ 0.242e-8■■□□□ 12.6
DDX52Q9Y2R4 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC12.21□□□□□ -0.452e-8■■□□□ 12.6
DDX52Q9Y2R4 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC10.83□□□□□ -0.682e-8■■□□□ 12.6
DDX52Q9Y2R4 PPP2R5C-215ENST00000556068 3363 ntTSL 27.68□□□□□ -1.182e-8■■□□□ 12.6
DDX52Q9Y2R4 MICALL2-204ENST00000467394 2080 ntTSL 223.15■■□□□ 1.38e-7■■□□□ 12.5
DDX52Q9Y2R4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.19■□□□□ 0.666e-6■■□□□ 12.5
DDX52Q9Y2R4 C2orf48-202ENST00000619640 480 ntTSL 1 (best)18.22■□□□□ 0.516e-6■■□□□ 12.5
DDX52Q9Y2R4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.93■□□□□ 0.36e-6■■□□□ 12.5
DDX52Q9Y2R4 EHBP1L1-211ENST00000634639 1643 ntTSL 529.54■■■□□ 2.325e-7■■□□□ 12.5
DDX52Q9Y2R4 EHBP1L1-208ENST00000533237 2267 ntTSL 529.52■■■□□ 2.325e-7■■□□□ 12.5
DDX52Q9Y2R4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.35e-7■■□□□ 12.5
DDX52Q9Y2R4 SCART1-205ENST00000488261 4709 ntTSL 220.72■□□□□ 0.912e-7■■□□□ 12.5
DDX52Q9Y2R4 SCART1-202ENST00000463137 4756 ntTSL 220.25■□□□□ 0.832e-7■■□□□ 12.5
DDX52Q9Y2R4 SCART1-204ENST00000482993 4904 ntTSL 220.08■□□□□ 0.82e-7■■□□□ 12.5
DDX52Q9Y2R4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.362e-7■■□□□ 12.5
DDX52Q9Y2R4 FAM182B-205ENST00000478164 992 ntTSL 518.63■□□□□ 0.573e-31■■□□□ 12.5
DDX52Q9Y2R4 FAM182B-207ENST00000582267 832 ntTSL 516.88■□□□□ 0.293e-31■■□□□ 12.5
DDX52Q9Y2R4 RNASET2-209ENST00000499370 2164 ntTSL 212.27□□□□□ -0.452e-6■■□□□ 12.4
DDX52Q9Y2R4 RNASET2-208ENST00000496851 881 ntTSL 511.67□□□□□ -0.542e-6■■□□□ 12.4
DDX52Q9Y2R4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.23■□□□□ 0.837e-7■■□□□ 12.4
DDX52Q9Y2R4 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC12.72□□□□□ -0.377e-7■■□□□ 12.4
DDX52Q9Y2R4 PFKFB3-218ENST00000639949 587 ntTSL 410.73□□□□□ -0.697e-7■■□□□ 12.4
DDX52Q9Y2R4 LARP1-215ENST00000524248 2128 ntTSL 518.1■□□□□ 0.493e-7■■□□□ 12.4
DDX52Q9Y2R4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.558e-15■■□□□ 12.3
DDX52Q9Y2R4 SPN-205ENST00000563039 1853 ntTSL 522.91■■□□□ 1.268e-15■■□□□ 12.3
DDX52Q9Y2R4 RN7SKP230-201ENST00000365642 335 ntBASIC17.79■□□□□ 0.441e-6■■□□□ 12.3
DDX52Q9Y2R4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.018e-15■■□□□ 12.3
DDX52Q9Y2R4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.59□□□□□ -1.356e-7■■□□□ 12.3
DDX52Q9Y2R4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.234e-42■■□□□ 12.2
DDX52Q9Y2R4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.114e-42■■□□□ 12.2
DDX52Q9Y2R4 RNA5SP145-201ENST00000363124 125 ntBASIC10.24□□□□□ -0.774e-42■■□□□ 12.2
DDX52Q9Y2R4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.324e-42■■□□□ 12.2
DDX52Q9Y2R4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.624e-42■■□□□ 12.2
DDX52Q9Y2R4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.26■□□□□ 0.673e-6■■□□□ 12.2
DDX52Q9Y2R4 ALB-215ENST00000510166 532 ntTSL 310.65□□□□□ -0.72e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.88□□□□□ -0.992e-64■■□□□ 12.2
DDX52Q9Y2R4 ALB-204ENST00000441319 591 ntTSL 47.08□□□□□ -1.282e-64■■□□□ 12.2
Retrieved 100 of 4,483 protein–RNA pairs in 80.1 ms