Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.5■■■□□ 2.47
NINLQ9Y2I6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
NINLQ9Y2I6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
NINLQ9Y2I6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC30.49■■■□□ 2.47
NINLQ9Y2I6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.49■■■□□ 2.47
NINLQ9Y2I6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
NINLQ9Y2I6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
NINLQ9Y2I6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
NINLQ9Y2I6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 AC068587.7-201ENST00000641602 218 ntBASIC30.46■■■□□ 2.47
NINLQ9Y2I6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 AC092068.2-201ENST00000590491 1708 ntBASIC30.46■■■□□ 2.47
NINLQ9Y2I6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.46■■■□□ 2.47
NINLQ9Y2I6 AC004687.1-201ENST00000579003 1625 ntBASIC30.46■■■□□ 2.47
NINLQ9Y2I6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 AC123595.1-201ENST00000440769 1046 ntBASIC30.45■■■□□ 2.47
NINLQ9Y2I6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 AL031602.1-201ENST00000633169 911 ntBASIC30.45■■■□□ 2.47
NINLQ9Y2I6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.45■■■□□ 2.47
NINLQ9Y2I6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
NINLQ9Y2I6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
NINLQ9Y2I6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NINLQ9Y2I6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NINLQ9Y2I6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
NINLQ9Y2I6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
NINLQ9Y2I6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
NINLQ9Y2I6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.43■■■□□ 2.46
NINLQ9Y2I6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
NINLQ9Y2I6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
NINLQ9Y2I6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC30.41■■■□□ 2.46
NINLQ9Y2I6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC30.4■■■□□ 2.46
NINLQ9Y2I6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.39■■■□□ 2.46
NINLQ9Y2I6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
NINLQ9Y2I6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NINLQ9Y2I6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.39■■■□□ 2.46
NINLQ9Y2I6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.39■■■□□ 2.46
NINLQ9Y2I6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NINLQ9Y2I6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC30.39■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms