Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.39■■□□□ 1.66
PCDHA4Q9UN74 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA4Q9UN74 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDHA4Q9UN74 AC096631.2-201ENST00000436136 790 ntBASIC25.39■■□□□ 1.66
PCDHA4Q9UN74 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
PCDHA4Q9UN74 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
PCDHA4Q9UN74 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.39■■□□□ 1.65
PCDHA4Q9UN74 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.39■■□□□ 1.65
PCDHA4Q9UN74 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 AC011298.3-201ENST00000615796 283 ntBASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHA4Q9UN74 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA4Q9UN74 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PCDHA4Q9UN74 AC068473.5-201ENST00000616428 2072 ntBASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 AL136162.1-201ENST00000607711 1078 ntBASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 AC136469.2-201ENST00000623944 1028 ntBASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHA4Q9UN74 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 AC024257.2-201ENST00000549699 147 ntBASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 AC110285.6-201ENST00000617652 491 ntBASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHA4Q9UN74 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA4Q9UN74 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA4Q9UN74 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHA4Q9UN74 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHA4Q9UN74 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHA4Q9UN74 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PCDHA4Q9UN74 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHA4Q9UN74 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 AC135279.3-201ENST00000610945 1311 ntBASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
PCDHA4Q9UN74 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHA4Q9UN74 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms