Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 C9orf163-202ENST00000624034 2573 ntBASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA6Q9UN73 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 AC142381.2-201ENST00000566120 298 ntBASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PCDHA6Q9UN73 AC133637.1-201ENST00000624115 1537 ntBASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 AL136967.2-201ENST00000623968 743 ntBASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
PCDHA6Q9UN73 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 AP001330.3-201ENST00000520123 633 ntBASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 AF213884.3-201ENST00000563833 479 ntBASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA6Q9UN73 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA6Q9UN73 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 MIR939-201ENST00000401314 82 ntBASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.4■■□□□ 1.66
PCDHA6Q9UN73 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA6Q9UN73 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.39■■□□□ 1.66
PCDHA6Q9UN73 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA6Q9UN73 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDHA6Q9UN73 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDHA6Q9UN73 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.39■■□□□ 1.66
PCDHA6Q9UN73 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.39■■□□□ 1.65
PCDHA6Q9UN73 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
PCDHA6Q9UN73 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHA6Q9UN73 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA6Q9UN73 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 AC008764.7-201ENST00000593779 1081 ntBASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDHA6Q9UN73 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHA6Q9UN73 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms