Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNOT11Q9UKZ1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 KRT16P3-201ENST00000439127 1283 ntBASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNOT11Q9UKZ1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 SNX5-217ENST00000606557 1087 ntBASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNOT11Q9UKZ1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 AL161729.1-201ENST00000604104 1402 ntBASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNOT11Q9UKZ1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 MTDHP2-201ENST00000601468 714 ntBASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 AC010997.5-201ENST00000609182 354 ntBASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 C11orf96-202ENST00000528572 1834 ntBASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT11Q9UKZ1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CNOT11Q9UKZ1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 AC092053.2-201ENST00000640557 1818 ntBASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CNOT11Q9UKZ1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms