Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 AC079630.1-202ENST00000618127 1840 ntBASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 MIR3181-201ENST00000578512 73 ntBASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GTF3C4Q9UKN8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 EDA-201ENST00000338901 1233 ntBASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 SUDS3P1-201ENST00000505831 966 ntBASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 MIR4767-201ENST00000582827 78 ntBASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 AL138724.1-201ENST00000606771 1088 ntBASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.83■■□□□ 1.41
GTF3C4Q9UKN8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
GTF3C4Q9UKN8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.83■■□□□ 1.4
GTF3C4Q9UKN8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
GTF3C4Q9UKN8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 AC142381.2-201ENST00000566120 298 ntBASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 AC011298.3-201ENST00000615796 283 ntBASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 AL355001.2-201ENST00000620617 1191 ntBASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GTF3C4Q9UKN8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 pRNA.6-201ENST00000610482 90 ntBASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 pRNA.5-201ENST00000612139 90 ntBASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 pRNA.11-201ENST00000618423 90 ntBASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 pRNA.13-201ENST00000619112 90 ntBASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GTF3C4Q9UKN8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GTF3C4Q9UKN8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.79■■□□□ 1.4
GTF3C4Q9UKN8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 AC144652.1-201ENST00000609974 1624 ntBASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 C1orf229-201ENST00000623686 2258 ntBASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GTF3C4Q9UKN8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C4Q9UKN8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C4Q9UKN8 AC136469.2-201ENST00000623944 1028 ntBASIC23.77■■□□□ 1.4
GTF3C4Q9UKN8 AL136967.2-201ENST00000623968 743 ntBASIC23.77■■□□□ 1.4
GTF3C4Q9UKN8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C4Q9UKN8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
GTF3C4Q9UKN8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms