Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 MIR6821-201ENST00000617625 74 ntBASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCF1Q9UBD9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 AC097381.1-201ENST00000429019 1296 ntBASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 AP005435.1-201ENST00000529293 1178 ntBASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCF1Q9UBD9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCF1Q9UBD9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 AC004687.1-201ENST00000579003 1625 ntBASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 MIR572-201ENST00000384983 95 ntBASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 MIR5787-201ENST00000611784 55 ntBASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCF1Q9UBD9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCF1Q9UBD9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLCF1Q9UBD9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 ANOS2P-203ENST00000472227 1816 ntBASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCF1Q9UBD9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 AC092068.2-201ENST00000590491 1708 ntBASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCF1Q9UBD9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms