Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
TFCP2L1Q9NZI6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.45■■■□□ 2.14
TFCP2L1Q9NZI6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC28.44■■■□□ 2.14
TFCP2L1Q9NZI6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC28.43■■■□□ 2.14
TFCP2L1Q9NZI6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TFCP2L1Q9NZI6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TFCP2L1Q9NZI6 FP325331.1-202ENST00000623531 1380 ntBASIC28.43■■■□□ 2.14
TFCP2L1Q9NZI6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.43■■■□□ 2.14
TFCP2L1Q9NZI6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.43■■■□□ 2.14
TFCP2L1Q9NZI6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TFCP2L1Q9NZI6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 BX005040.4-201ENST00000637145 1518 ntBASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
TFCP2L1Q9NZI6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 AL121832.2-201ENST00000610979 668 ntBASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
TFCP2L1Q9NZI6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.39■■■□□ 2.14
TFCP2L1Q9NZI6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TFCP2L1Q9NZI6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TFCP2L1Q9NZI6 AC083906.2-201ENST00000511578 360 ntBASIC28.39■■■□□ 2.14
TFCP2L1Q9NZI6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TFCP2L1Q9NZI6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
TFCP2L1Q9NZI6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TFCP2L1Q9NZI6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 TSPY6P-201ENST00000448518 926 ntBASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 MIR4651-201ENST00000582622 73 ntBASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TFCP2L1Q9NZI6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.36■■■□□ 2.13
TFCP2L1Q9NZI6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 AC093827.2-201ENST00000512654 315 ntBASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 AL050303.2-201ENST00000619798 666 ntBASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TFCP2L1Q9NZI6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
TFCP2L1Q9NZI6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.34■■■□□ 2.13
TFCP2L1Q9NZI6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms