Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PRDM9Q9NQV7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 AC133561.4-201ENST00000566112 224 ntBASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRDM9Q9NQV7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRDM9Q9NQV7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 AC136469.2-201ENST00000623944 1028 ntBASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 AC068473.5-201ENST00000616428 2072 ntBASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRDM9Q9NQV7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.89■□□□□ 0.94
PRDM9Q9NQV7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.89■□□□□ 0.94
PRDM9Q9NQV7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
PRDM9Q9NQV7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PRDM9Q9NQV7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PRDM9Q9NQV7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PRDM9Q9NQV7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 MIR638-201ENST00000385237 100 ntBASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRDM9Q9NQV7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 MIR4767-201ENST00000582827 78 ntBASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRDM9Q9NQV7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 EDA-201ENST00000338901 1233 ntBASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 AC133637.1-201ENST00000624115 1537 ntBASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
PRDM9Q9NQV7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRDM9Q9NQV7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.85■□□□□ 0.93
PRDM9Q9NQV7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms