Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NECTIN3Q9NQS3 AC233723.2-201ENST00000623798 2106 ntBASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.11■□□□□ 0.97
NECTIN3Q9NQS3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.1■□□□□ 0.97
NECTIN3Q9NQS3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 AC099791.2-201ENST00000605725 427 ntBASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN3Q9NQS3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN3Q9NQS3 AL024507.2-201ENST00000606070 2574 ntBASIC21.08■□□□□ 0.96
NECTIN3Q9NQS3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NECTIN3Q9NQS3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NECTIN3Q9NQS3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.07■□□□□ 0.96
NECTIN3Q9NQS3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
NECTIN3Q9NQS3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 AC096631.2-201ENST00000436136 790 ntBASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN3Q9NQS3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN3Q9NQS3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms