Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 AC024257.2-201ENST00000549699 147 ntBASIC18.97■□□□□ 0.63
MSL2Q9HCI7 AL139246.5-201ENST00000606645 996 ntBASIC18.97■□□□□ 0.63
MSL2Q9HCI7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 AC135279.3-201ENST00000610945 1311 ntBASIC18.97■□□□□ 0.63
MSL2Q9HCI7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
MSL2Q9HCI7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSL2Q9HCI7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.96■□□□□ 0.63
MSL2Q9HCI7 DUSP8P5-201ENST00000422884 1815 ntBASIC18.96■□□□□ 0.63
MSL2Q9HCI7 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.96■□□□□ 0.63
MSL2Q9HCI7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.96■□□□□ 0.63
MSL2Q9HCI7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MSL2Q9HCI7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 AL499627.2-201ENST00000606283 725 ntBASIC18.95■□□□□ 0.62
MSL2Q9HCI7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 DUSP8P3-201ENST00000399571 1760 ntBASIC18.95■□□□□ 0.62
MSL2Q9HCI7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.95■□□□□ 0.62
MSL2Q9HCI7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 AL138724.1-201ENST00000606771 1088 ntBASIC18.94■□□□□ 0.62
MSL2Q9HCI7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 AC133637.1-201ENST00000624115 1537 ntBASIC18.94■□□□□ 0.62
MSL2Q9HCI7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MSL2Q9HCI7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 AC011298.3-201ENST00000615796 283 ntBASIC18.93■□□□□ 0.62
MSL2Q9HCI7 AC106739.1-201ENST00000617035 715 ntBASIC18.93■□□□□ 0.62
MSL2Q9HCI7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.93■□□□□ 0.62
MSL2Q9HCI7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 MIR4767-201ENST00000582827 78 ntBASIC18.92■□□□□ 0.62
MSL2Q9HCI7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 AC004687.1-201ENST00000579003 1625 ntBASIC18.92■□□□□ 0.62
MSL2Q9HCI7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MSL2Q9HCI7 C9orf163-202ENST00000624034 2573 ntBASIC18.91■□□□□ 0.62
MSL2Q9HCI7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.91■□□□□ 0.62
MSL2Q9HCI7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms