Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
POPDC3Q9HBV1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
POPDC3Q9HBV1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POPDC3Q9HBV1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
POPDC3Q9HBV1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 AC139530.1-201ENST00000575312 1977 ntBASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.78■■□□□ 1.08
POPDC3Q9HBV1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 LINC01960-201ENST00000563759 1884 ntBASIC21.77■■□□□ 1.08
POPDC3Q9HBV1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POPDC3Q9HBV1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 AL499627.2-201ENST00000606283 725 ntBASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 AL117332.1-201ENST00000622628 974 ntBASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 AL035685.1-201ENST00000636663 812 ntBASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 AC092053.2-201ENST00000640557 1818 ntBASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
POPDC3Q9HBV1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 KRT16P3-201ENST00000439127 1283 ntBASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POPDC3Q9HBV1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.73■■□□□ 1.07
POPDC3Q9HBV1 AC241377.3-202ENST00000626088 1088 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms