Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 AL353803.4-201ENST00000565882 1934 ntBASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 AC139530.1-201ENST00000575312 1977 ntBASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 AC019171.1-201ENST00000601251 1056 ntBASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms