Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 AL353803.4-201ENST00000565882 1934 ntBASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF556Q9HAH1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZNF556Q9HAH1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF556Q9HAH1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 AC139530.1-201ENST00000575312 1977 ntBASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF556Q9HAH1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF556Q9HAH1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF556Q9HAH1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF556Q9HAH1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 AC019171.1-201ENST00000601251 1056 ntBASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF556Q9HAH1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms