Protein–RNA interactions for Protein: Q9H9Q4

NHEJ1, Non-homologous end-joining factor 1, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHEJ1Q9H9Q4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NHEJ1Q9H9Q4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NHEJ1Q9H9Q4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 AC103834.1-201ENST00000520383 144 ntBASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NHEJ1Q9H9Q4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NHEJ1Q9H9Q4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
NHEJ1Q9H9Q4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.81■■□□□ 1.4
NHEJ1Q9H9Q4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NHEJ1Q9H9Q4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NHEJ1Q9H9Q4 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.8■■□□□ 1.4
NHEJ1Q9H9Q4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NHEJ1Q9H9Q4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NHEJ1Q9H9Q4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
NHEJ1Q9H9Q4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NHEJ1Q9H9Q4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 AC103724.3-201ENST00000564481 992 ntBASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NHEJ1Q9H9Q4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 LINC01529-204ENST00000636474 1715 ntBASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NHEJ1Q9H9Q4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
NHEJ1Q9H9Q4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 FBXW4P1-201ENST00000426721 2239 ntBASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 AL137060.1-201ENST00000618151 2648 ntBASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 AC137630.3-201ENST00000607245 391 ntBASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NHEJ1Q9H9Q4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 KRT8P33-201ENST00000508125 1423 ntBASIC23.75■■□□□ 1.39
NHEJ1Q9H9Q4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
NHEJ1Q9H9Q4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms