Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
ZNF408Q9H9D4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF408Q9H9D4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF408Q9H9D4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF408Q9H9D4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
ZNF408Q9H9D4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZNF408Q9H9D4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 KRT18P11-201ENST00000435214 1283 ntBASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 AC093827.2-201ENST00000512654 315 ntBASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZNF408Q9H9D4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 AL121832.2-201ENST00000610979 668 ntBASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.33■■□□□ 1.81
ZNF408Q9H9D4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 AC083906.2-201ENST00000511578 360 ntBASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ZNF408Q9H9D4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 BX005040.4-201ENST00000637145 1518 ntBASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ZNF408Q9H9D4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 FAM201B-201ENST00000458407 597 ntBASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 AL050303.2-201ENST00000619798 666 ntBASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ZNF408Q9H9D4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 TSPY6P-201ENST00000448518 926 ntBASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ZNF408Q9H9D4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 AL138781.1-201ENST00000566567 1274 ntBASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ZNF408Q9H9D4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 FP325331.1-202ENST00000623531 1380 ntBASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ZNF408Q9H9D4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ZNF408Q9H9D4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 MFSD11-216ENST00000590393 1141 ntBASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ZNF408Q9H9D4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms