Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 CDCA4P2-201ENST00000441182 718 ntBASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 AC142381.3-201ENST00000568208 1670 ntBASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTFDC1Q9BY42 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTFDC1Q9BY42 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTFDC1Q9BY42 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.25■■□□□ 1.95
RTFDC1Q9BY42 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.25■■□□□ 1.95
RTFDC1Q9BY42 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.25■■□□□ 1.95
RTFDC1Q9BY42 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTFDC1Q9BY42 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.24■■□□□ 1.95
RTFDC1Q9BY42 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 AC073111.5-205ENST00000641717 521 ntBASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.23■■□□□ 1.95
RTFDC1Q9BY42 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTFDC1Q9BY42 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 AP004607.4-201ENST00000530158 1459 ntBASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTFDC1Q9BY42 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.2■■□□□ 1.95
RTFDC1Q9BY42 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
RTFDC1Q9BY42 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.2■■□□□ 1.94
RTFDC1Q9BY42 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
RTFDC1Q9BY42 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.2■■□□□ 1.94
RTFDC1Q9BY42 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.2■■□□□ 1.94
RTFDC1Q9BY42 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.2■■□□□ 1.94
RTFDC1Q9BY42 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
RTFDC1Q9BY42 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 AC020928.2-201ENST00000588717 2197 ntBASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 AC137761.2-201ENST00000561729 223 ntBASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 AC145350.3-201ENST00000569033 163 ntBASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RTFDC1Q9BY42 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RTFDC1Q9BY42 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.18■■□□□ 1.94
RTFDC1Q9BY42 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.18■■□□□ 1.94
RTFDC1Q9BY42 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.18■■□□□ 1.94
RTFDC1Q9BY42 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RTFDC1Q9BY42 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RTFDC1Q9BY42 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms