Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRFN3Q9BTN0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
LRFN3Q9BTN0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 AC097639.1-201ENST00000565519 1891 ntBASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 LINC01023-201ENST00000606054 436 ntBASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LRFN3Q9BTN0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
LRFN3Q9BTN0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 AC079140.4-201ENST00000507448 529 ntBASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRFN3Q9BTN0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRFN3Q9BTN0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 MIPEPP3-201ENST00000412105 444 ntBASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRFN3Q9BTN0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.48■■□□□ 1.19
LRFN3Q9BTN0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRFN3Q9BTN0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.47■■□□□ 1.19
LRFN3Q9BTN0 UBE2DNL-204ENST00000602536 740 ntBASIC22.47■■□□□ 1.19
LRFN3Q9BTN0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.47■■□□□ 1.19
LRFN3Q9BTN0 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.47■■□□□ 1.19
LRFN3Q9BTN0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRFN3Q9BTN0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 CNN2P6-201ENST00000439038 900 ntBASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
LRFN3Q9BTN0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms