Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.03■□□□□ 0.96
CGREF1Q99674 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CGREF1Q99674 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.03■□□□□ 0.96
CGREF1Q99674 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CGREF1Q99674 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CGREF1Q99674 ABHD17AP5-201ENST00000580133 923 ntBASIC21.02■□□□□ 0.96
CGREF1Q99674 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.02■□□□□ 0.96
CGREF1Q99674 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGREF1Q99674 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.02■□□□□ 0.96
CGREF1Q99674 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.02■□□□□ 0.96
CGREF1Q99674 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.02■□□□□ 0.96
CGREF1Q99674 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CGREF1Q99674 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CGREF1Q99674 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.01■□□□□ 0.95
CGREF1Q99674 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.01■□□□□ 0.95
CGREF1Q99674 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CGREF1Q99674 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CGREF1Q99674 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21■□□□□ 0.95
CGREF1Q99674 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21■□□□□ 0.95
CGREF1Q99674 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21■□□□□ 0.95
CGREF1Q99674 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21■□□□□ 0.95
CGREF1Q99674 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CGREF1Q99674 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGREF1Q99674 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGREF1Q99674 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.99■□□□□ 0.95
CGREF1Q99674 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.99■□□□□ 0.95
CGREF1Q99674 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGREF1Q99674 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGREF1Q99674 ATP5G2P3-201ENST00000429083 425 ntBASIC20.99■□□□□ 0.95
CGREF1Q99674 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.99■□□□□ 0.95
CGREF1Q99674 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.99■□□□□ 0.95
CGREF1Q99674 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
CGREF1Q99674 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CGREF1Q99674 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CGREF1Q99674 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CGREF1Q99674 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CGREF1Q99674 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CGREF1Q99674 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGREF1Q99674 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.98■□□□□ 0.95
CGREF1Q99674 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.98■□□□□ 0.95
CGREF1Q99674 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.98■□□□□ 0.95
CGREF1Q99674 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGREF1Q99674 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGREF1Q99674 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.98■□□□□ 0.95
CGREF1Q99674 AC004987.1-201ENST00000428627 508 ntBASIC20.98■□□□□ 0.95
CGREF1Q99674 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.98■□□□□ 0.95
CGREF1Q99674 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGREF1Q99674 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CGREF1Q99674 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CGREF1Q99674 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CGREF1Q99674 AC010980.1-201ENST00000587192 1142 ntBASIC20.97■□□□□ 0.95
CGREF1Q99674 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.97■□□□□ 0.95
CGREF1Q99674 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CGREF1Q99674 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGREF1Q99674 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CGREF1Q99674 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGREF1Q99674 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGREF1Q99674 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.96■□□□□ 0.95
CGREF1Q99674 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.96■□□□□ 0.95
CGREF1Q99674 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.96■□□□□ 0.95
CGREF1Q99674 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CGREF1Q99674 SNX5-217ENST00000606557 1087 ntBASIC20.96■□□□□ 0.95
CGREF1Q99674 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.96■□□□□ 0.95
CGREF1Q99674 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CGREF1Q99674 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.95■□□□□ 0.94
CGREF1Q99674 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 AL137060.1-201ENST00000618151 2648 ntBASIC20.95■□□□□ 0.94
CGREF1Q99674 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGREF1Q99674 FBXW4P1-201ENST00000426721 2239 ntBASIC20.94■□□□□ 0.94
CGREF1Q99674 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.94■□□□□ 0.94
CGREF1Q99674 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CGREF1Q99674 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CGREF1Q99674 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms