Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV9Q99603 AC103834.1-201ENST00000520383 144 ntBASIC17.27■□□□□ 0.36
TRGV9Q99603 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV9Q99603 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRGV9Q99603 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.27■□□□□ 0.36
TRGV9Q99603 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.27■□□□□ 0.35
TRGV9Q99603 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.27■□□□□ 0.35
TRGV9Q99603 AC087742.1-201ENST00000575880 1738 ntBASIC17.27■□□□□ 0.35
TRGV9Q99603 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV9Q99603 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRGV9Q99603 PKD1P6-201ENST00000343738 4769 ntBASIC17.27■□□□□ 0.35
TRGV9Q99603 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRGV9Q99603 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.26■□□□□ 0.35
TRGV9Q99603 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 C11orf96-202ENST00000528572 1834 ntBASIC17.26■□□□□ 0.35
TRGV9Q99603 AC005703.6-201ENST00000623265 1329 ntBASIC17.26■□□□□ 0.35
TRGV9Q99603 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.26■□□□□ 0.35
TRGV9Q99603 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.26■□□□□ 0.35
TRGV9Q99603 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.26■□□□□ 0.35
TRGV9Q99603 AC103724.3-201ENST00000564481 992 ntBASIC17.26■□□□□ 0.35
TRGV9Q99603 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV9Q99603 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.26■□□□□ 0.35
TRGV9Q99603 MIR6722-201ENST00000617286 78 ntBASIC17.26■□□□□ 0.35
TRGV9Q99603 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV9Q99603 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRGV9Q99603 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.26■□□□□ 0.35
TRGV9Q99603 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.26■□□□□ 0.35
TRGV9Q99603 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRGV9Q99603 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRGV9Q99603 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.25■□□□□ 0.35
TRGV9Q99603 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.25■□□□□ 0.35
TRGV9Q99603 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRGV9Q99603 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRGV9Q99603 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.24■□□□□ 0.35
TRGV9Q99603 AC080038.3-201ENST00000623346 1952 ntBASIC17.24■□□□□ 0.35
TRGV9Q99603 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.24■□□□□ 0.35
TRGV9Q99603 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.24■□□□□ 0.35
TRGV9Q99603 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.24■□□□□ 0.35
TRGV9Q99603 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.24■□□□□ 0.35
TRGV9Q99603 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.24■□□□□ 0.35
TRGV9Q99603 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.24■□□□□ 0.35
TRGV9Q99603 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TRGV9Q99603 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRGV9Q99603 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV9Q99603 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.23■□□□□ 0.35
TRGV9Q99603 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV9Q99603 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
TRGV9Q99603 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV9Q99603 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRGV9Q99603 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV9Q99603 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRGV9Q99603 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV9Q99603 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRGV9Q99603 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.22■□□□□ 0.35
TRGV9Q99603 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV9Q99603 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV9Q99603 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
TRGV9Q99603 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRGV9Q99603 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRGV9Q99603 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.22■□□□□ 0.35
TRGV9Q99603 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TRGV9Q99603 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV9Q99603 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRGV9Q99603 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.22■□□□□ 0.35
TRGV9Q99603 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV9Q99603 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV9Q99603 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
TRGV9Q99603 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRGV9Q99603 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV9Q99603 AL033527.3-201ENST00000566366 1196 ntBASIC17.21■□□□□ 0.35
TRGV9Q99603 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRGV9Q99603 AL031848.2-201ENST00000607670 837 ntBASIC17.21■□□□□ 0.35
TRGV9Q99603 AC009086.3-201ENST00000623486 1008 ntBASIC17.21■□□□□ 0.35
TRGV9Q99603 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV9Q99603 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV9Q99603 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms