Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 AC004687.1-201ENST00000579003 1625 ntBASIC22.13■■□□□ 1.13
LYSMD1Q96S90 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
LYSMD1Q96S90 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 AL355001.2-201ENST00000620617 1191 ntBASIC22.12■■□□□ 1.13
LYSMD1Q96S90 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.12■■□□□ 1.13
LYSMD1Q96S90 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.11■■□□□ 1.13
LYSMD1Q96S90 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.11■■□□□ 1.13
LYSMD1Q96S90 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD1Q96S90 BX842568.3-201ENST00000418104 571 ntBASIC22.11■■□□□ 1.13
LYSMD1Q96S90 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 SUDS3P1-201ENST00000505831 966 ntBASIC22.1■■□□□ 1.13
LYSMD1Q96S90 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD1Q96S90 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD1Q96S90 AP001330.3-201ENST00000520123 633 ntBASIC22.09■■□□□ 1.13
LYSMD1Q96S90 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.09■■□□□ 1.13
LYSMD1Q96S90 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD1Q96S90 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
LYSMD1Q96S90 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD1Q96S90 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.09■■□□□ 1.13
LYSMD1Q96S90 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.08■■□□□ 1.13
LYSMD1Q96S90 AC005837.3-201ENST00000612163 286 ntBASIC22.08■■□□□ 1.13
LYSMD1Q96S90 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.08■■□□□ 1.12
LYSMD1Q96S90 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LYSMD1Q96S90 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 MIR939-201ENST00000401314 82 ntBASIC22.07■■□□□ 1.12
LYSMD1Q96S90 SLC47A1P1-202ENST00000449666 945 ntBASIC22.07■■□□□ 1.12
LYSMD1Q96S90 AC233992.3-201ENST00000607491 485 ntBASIC22.07■■□□□ 1.12
LYSMD1Q96S90 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD1Q96S90 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD1Q96S90 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LYSMD1Q96S90 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD1Q96S90 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD1Q96S90 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.05■■□□□ 1.12
LYSMD1Q96S90 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD1Q96S90 AC027682.1-201ENST00000562846 899 ntBASIC22.05■■□□□ 1.12
LYSMD1Q96S90 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD1Q96S90 AC010525.1-201ENST00000585559 441 ntBASIC22.05■■□□□ 1.12
LYSMD1Q96S90 AL136967.2-201ENST00000623968 743 ntBASIC22.05■■□□□ 1.12
LYSMD1Q96S90 AL031602.1-201ENST00000633169 911 ntBASIC22.05■■□□□ 1.12
LYSMD1Q96S90 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms