Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC46A1Q96NT5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 AC010525.1-201ENST00000585559 441 ntBASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 AC004812.2-201ENST00000611079 2094 ntBASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC46A1Q96NT5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 OR2I1P-207ENST00000453522 948 ntBASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
SLC46A1Q96NT5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC46A1Q96NT5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 AP005435.1-201ENST00000529293 1178 ntBASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC46A1Q96NT5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 HLA-L-209ENST00000420110 1011 ntBASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 AC093323.1-202ENST00000635031 2045 ntBASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 FP325331.1-202ENST00000623531 1380 ntBASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC46A1Q96NT5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC46A1Q96NT5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC46A1Q96NT5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SLC46A1Q96NT5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC46A1Q96NT5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SLC46A1Q96NT5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC46A1Q96NT5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms