Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC087742.1-201ENST00000575880 1738 ntBASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM5Q96HC4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM5Q96HC4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 AC242852.2-201ENST00000615738 1807 ntBASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM5Q96HC4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDLIM5Q96HC4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM5Q96HC4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
PDLIM5Q96HC4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDLIM5Q96HC4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.64■■□□□ 1.06
PDLIM5Q96HC4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 LINC00526-201ENST00000581067 1875 ntBASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM5Q96HC4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 AC004687.1-201ENST00000579003 1625 ntBASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.63■■□□□ 1.05
PDLIM5Q96HC4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 AL356441.2-201ENST00000443009 864 ntBASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PDLIM5Q96HC4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM5Q96HC4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms