Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC47A1Q96FL8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 MIR4281-201ENST00000580852 62 ntBASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC47A1Q96FL8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC47A1Q96FL8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC47A1Q96FL8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC47A1Q96FL8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC47A1Q96FL8 AL353803.4-201ENST00000565882 1934 ntBASIC20.83■□□□□ 0.93
SLC47A1Q96FL8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC47A1Q96FL8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC47A1Q96FL8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC47A1Q96FL8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC47A1Q96FL8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC47A1Q96FL8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC47A1Q96FL8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC47A1Q96FL8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC47A1Q96FL8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 AC080038.3-201ENST00000623346 1952 ntBASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 AF131216.4-201ENST00000638924 1588 ntBASIC20.8■□□□□ 0.92
SLC47A1Q96FL8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 YBX1P4-201ENST00000392794 808 ntBASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 AL024507.2-201ENST00000606070 2574 ntBASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC47A1Q96FL8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 FBXW4P1-201ENST00000426721 2239 ntBASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC47A1Q96FL8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC47A1Q96FL8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms