Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
VPS33AQ96AX1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 AC074183.2-201ENST00000623112 922 ntBASIC21.23■□□□□ 0.99
VPS33AQ96AX1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VPS33AQ96AX1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VPS33AQ96AX1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VPS33AQ96AX1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.2■□□□□ 0.99
VPS33AQ96AX1 AC092053.2-201ENST00000640557 1818 ntBASIC21.2■□□□□ 0.98
VPS33AQ96AX1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS33AQ96AX1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 C11orf96-202ENST00000528572 1834 ntBASIC21.19■□□□□ 0.98
VPS33AQ96AX1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS33AQ96AX1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 AC087742.1-201ENST00000575880 1738 ntBASIC21.18■□□□□ 0.98
VPS33AQ96AX1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 AL137060.1-201ENST00000618151 2648 ntBASIC21.18■□□□□ 0.98
VPS33AQ96AX1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS33AQ96AX1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 TSPY13P-201ENST00000338964 914 ntBASIC21.17■□□□□ 0.98
VPS33AQ96AX1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 AC144652.1-201ENST00000609974 1624 ntBASIC21.17■□□□□ 0.98
VPS33AQ96AX1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS33AQ96AX1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.16■□□□□ 0.98
VPS33AQ96AX1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms