Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 C11orf96-202ENST00000528572 1834 ntBASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 LONRF2P2-201ENST00000439212 571 ntBASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.26■□□□□ 0.83
TRUB1Q8WWH5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 AC139530.1-201ENST00000575312 1977 ntBASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 SPCS2P3-201ENST00000500401 656 ntBASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 MIR6765-201ENST00000614092 87 ntBASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 FBXW4P1-201ENST00000426721 2239 ntBASIC20.25■□□□□ 0.83
TRUB1Q8WWH5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRUB1Q8WWH5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 AL592293.1-201ENST00000502889 1188 ntBASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRUB1Q8WWH5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRUB1Q8WWH5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 AC026310.3-201ENST00000625186 2373 ntBASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRUB1Q8WWH5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB1Q8WWH5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms