Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 FBXW4P1-201ENST00000426721 2239 ntBASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 BHLHE23-202ENST00000612929 1109 ntBASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 PVT1_1.1-201ENST00000615125 194 ntBASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4Y2Q8TD47 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.41■□□□□ 0.7
RPS4Y2Q8TD47 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.41■□□□□ 0.7
RPS4Y2Q8TD47 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4Y2Q8TD47 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4Y2Q8TD47 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.41■□□□□ 0.7
RPS4Y2Q8TD47 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4Y2Q8TD47 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4Y2Q8TD47 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
RPS4Y2Q8TD47 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.39■□□□□ 0.7
RPS4Y2Q8TD47 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPS4Y2Q8TD47 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 SNX5-217ENST00000606557 1087 ntBASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RPS4Y2Q8TD47 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 AC074183.2-201ENST00000623112 922 ntBASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4Y2Q8TD47 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 AL137060.1-201ENST00000618151 2648 ntBASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4Y2Q8TD47 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4Y2Q8TD47 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4Y2Q8TD47 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms