Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC068473.5-201ENST00000616428 2072 ntBASIC19.34■□□□□ 0.69
CPEB3Q8NE35 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPEB3Q8NE35 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CPEB3Q8NE35 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPEB3Q8NE35 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CPEB3Q8NE35 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 AL499627.2-201ENST00000606283 725 ntBASIC19.32■□□□□ 0.68
CPEB3Q8NE35 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.32■□□□□ 0.68
CPEB3Q8NE35 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 AC092171.4-201ENST00000609130 632 ntBASIC19.31■□□□□ 0.68
CPEB3Q8NE35 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPEB3Q8NE35 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 AC133561.1-201ENST00000568600 2415 ntBASIC19.3■□□□□ 0.68
CPEB3Q8NE35 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 MIR3181-201ENST00000578512 73 ntBASIC19.3■□□□□ 0.68
CPEB3Q8NE35 pRNA.6-201ENST00000610482 90 ntBASIC19.3■□□□□ 0.68
CPEB3Q8NE35 pRNA.5-201ENST00000612139 90 ntBASIC19.3■□□□□ 0.68
CPEB3Q8NE35 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 pRNA.11-201ENST00000618423 90 ntBASIC19.3■□□□□ 0.68
CPEB3Q8NE35 pRNA.13-201ENST00000619112 90 ntBASIC19.3■□□□□ 0.68
CPEB3Q8NE35 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPEB3Q8NE35 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
CPEB3Q8NE35 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 C1orf229-201ENST00000623686 2258 ntBASIC19.28■□□□□ 0.68
CPEB3Q8NE35 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPEB3Q8NE35 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms