Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 AC080038.3-201ENST00000623346 1952 ntBASIC18.97■□□□□ 0.63
TMEM104Q8NE00 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM104Q8NE00 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM104Q8NE00 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 SNX5-217ENST00000606557 1087 ntBASIC18.95■□□□□ 0.62
TMEM104Q8NE00 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 AC144652.1-201ENST00000609974 1624 ntBASIC18.95■□□□□ 0.62
TMEM104Q8NE00 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TMEM104Q8NE00 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 MIR4508-201ENST00000584178 70 ntBASIC18.94■□□□□ 0.62
TMEM104Q8NE00 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TMEM104Q8NE00 AC087742.1-201ENST00000575880 1738 ntBASIC18.94■□□□□ 0.62
TMEM104Q8NE00 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 AC092053.2-201ENST00000640557 1818 ntBASIC18.93■□□□□ 0.62
TMEM104Q8NE00 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TMEM104Q8NE00 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM104Q8NE00 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 C11orf96-202ENST00000528572 1834 ntBASIC18.91■□□□□ 0.62
TMEM104Q8NE00 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 AC103834.1-201ENST00000520383 144 ntBASIC18.91■□□□□ 0.62
TMEM104Q8NE00 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM104Q8NE00 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
TMEM104Q8NE00 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms